A | B | |
Forward primer | /5Phos/GUCTATTTTCTGTTGGTGCTGATATTGC | |
Reverse primer | /5Phos/GUCTATACTTGCCTGTCGCTCTATCTTC |
A | B | |
uDumBell | /5Phos/ATAGACCGAGACAGTAGAAGACCATGAACAAGCAGCACACGATAAACTAGACACCCTACTGTCTCG |
A | B | |
Component | Volume (ul) | |
5X Reaction Buffer | 10 | |
5X Q5 High GC Enhancer | 10 | |
10 mM dNTPs | 1 | |
Forward primer | 2.5 | |
Reverse primer | 2.5 | |
DNA (5ng) | 2 | |
Q5 High-Fidelity DNA Polymerase | 1.5 | |
Nuclease-Free Water | 20.5 |
A | B | C | D | |
Step | Temp (C) | Time (s) | Cycles | |
Denaturation | 98 | 30 | 1 | |
Denaturation | 98 | 10 | 34 | |
Annealing | 62 | 10 | ||
Extension | 72 | 20 | ||
Extension | 72 | 2 | 1 |
A | B | |
Component | Volume (ul) | |
T4 DNA Ligase Buffer (10X) | 2 | |
PCR product (upto 1ug), as low as 50ng, probably much lower possible) | 10 | |
dumbell adapter | 3 | |
Ligase (add last, don’t vortex) | 1 | |
H20 | 4 |
A | B | |
Temp | Minutes | |
22 | 30 | |
15 | 120 | |
4 | 120 | |
65 | 5 |
A | B | |
Component | Volume (ul) | |
NEBuffer 4 (10x) | 1 | |
Exonuclease VIII (truncated) | 1 | |
DNA | 18 |