Reagent | 1. Thaw at room Temperature | 2. Briefly spin down | 3. Mix well by pipetting | |
User-supplied VN Primer diluted to 2 µM | ✓ | ✓ | ✓ | |
User-supplied Strand-Switching Primer diluted to 10 µM | ✓ | ✓ | ✓ | |
10 mM dNTP solution | ✓ | ✓ | ✓ | |
RNaseOUT | Not frozen | ✓ | ✓ | |
Maxima H Minus Reverse Transcriptase | Not frozen | ✓ | ✓ | |
Maxima H Minus 5x RT Buffer | ✓ | ✓ | Mix by vortexing |
Reagent | Volume | |
RNA input from previous step | 7.5 µl | |
VN Primer diluted to 2 µM | 2.5 µl | |
10 mM dNTPS | 1 µl | |
Total Volume | 11 µl |
5x RT Buffer | 4 µl | |
RNaseOUT | 1 µl | |
Nuclease-Free water | 1 µl | |
Strand-Switching Primer diluted to 10 uM | 2 µl | |
Total Volume | 8 µl |
Cycle Step | Temperature | Time | No. of cycles | |
Reverse Transcription and Strand-Switching | 42 ℃ | 90 minutes | 1 | |
Heat inactivation | 85 ℃ | 5 minutes | 1 | |
Hold | 4 ℃ | ∞ |
Reagent | 1. Thaw at room Temperature | 2. Briefly spin down | 3. Mix well by pipetting | |
User-supplied PR2 Primer diluted to 10 µM | ✓ | ✓ | ✓ | |
RNaes Cocktail Enzyme Mix | Not frozen | ✓ | ✓ | |
LongAmp Taq 2X Master Mix | ✓ | ✓ | ✓ |
Reagent | Volume | |
2x LongAmp Taq Master Mix | 25 µl | |
PR2 Primer diluted to 10 μM | 2 µl | |
Reverse-transcribed sample from above | 20 µl | |
Nuclease-free water | 3 µl | |
Total Volume | 50 µl |
Cycle Step | Temperature | Time | No. of cycles | |
Denaturation | 94 ℃ | 1 minute | 1 | |
Annealing | 50 ℃ | 1 minute | 1 | |
Extension | 65 ℃ | 15 minutes | 1 | |
Hold | 4 ℃ | ∞ |
Reagent | Volume | |
cDNA sample | 25 µl | |
Nuclease-free water | 30 µl | |
Ultra II End-prep reaction buffer | 7 µl | |
Ultra II End-prep enzyme mix | 3 µl | |
Total Volume | 60 µl |
Reagent | Volume | |
cDNA sample from the previous step | 60 µl | |
Ligation Adapter (LA) | 5 µl | |
Ligation Buffer (LNB) | 25 µl | |
NEBNext Quick T4 DNA Ligase | 10 µl | |
Total | 100 µl |
Fragment library length | Flow cell loading amount | |
Very short (<1 kb) | 100 fmol | |
Short (1-10 kb) | 35–50 fmol | |
Long (>10 kb) | 300 ng |
Reagent | Volume per flow cell | |
Flow Cell Flush (FCF) | 1,170 µl | |
Bovine Serum Albumin (BSA) at 50 mg/ml | 5 µl | |
Flow Cell Tether (FCT) | 30 µl | |
Total volume | 1,205 µl |
Reagent | Volume per flow cell | |
Sequencing Buffer (SB) | 37.5 µl | |
Library Beads (LIB) mixed immediately before use, or Library Solution (LIS), if using | 25.5 µl | |
DNA library | 12 µl | |
Total | 75 µl |